Reed, J. W. 1998. Phytochrome autophosphorylation - no longer a red/far-red herring? Trends in Plant Science 3: 43-44.

Reed, J. W., Elumalai, R. P., and Chory, J. 1998. Suppressors of an Arabidopsis thaliana phyB mutation identify genes that control light signaling and hypocotyl elongation. Genetics 148: 1295-1310.

Tian, Q., and Reed, J. W. 1999. Control of auxin-regulated root development by the Arabidopsis thaliana SHY2/IAA3 gene. Development 126: 711-721.

Reed, J. W. 1999. Phytochromes are Pr-ipatetic kinases. Current Opinion in Plant Biology 2: 393-397.

Reed, J. W., Nagpal, P., Bastow, R. M., Solomon, K. S., Dowson-Day, M. J., Elumalai, R. P., and Millar, A. J. 2000. Independent action of ELF3 and phyB to control hypocotyl elongation and flowering time. Plant Physiology 122: 1149-1160.

Nagpal, P., Walker, L. M., Young, J. C., Sonawala, A., Timpte, C., Estelle, M., and Reed., J. W. 2000. AXR2 encodes a member of the Aux/IAA protein family. Plant Physiology 123: 563-573.

Krall, L. and Reed, J. W. 2000. The histidine kinase-related domain participates in phytochrome B function but is dispensable. Proceedings of the National Academy of Sciences (USA) 97: 8169-8174.

Reed, J. W. 2001. Roles and activities of Aux/IAA proteins in Arabidopsis. Trends in Plant Science 6: 420-425.

Tian, Q. and Reed, J. W. 2001. Molecular links between light and auxin signaling. Journal of Plant Growth Regulation 20: 274-280.

Elumalai, R. P., Nagpal, P., and Reed, J. W. 2002. A mutation in the Arabidopsis KT2/KUP2 potassium transporter gene affects shoot cell expansion. Plant Cell 14: 119-131.

Tian, Q. Uhlir, N. J., and Reed, J. W. 2002. SHY2/IAA3 inhibits auxin-regulated gene expression. Plant Cell 14: 301-319.

Liscum, E. and Reed, J. W. 2002. Genetics of ARF and Aux/IAA proteins in plant growth and development. Plant Molecular Biology 49: 387-400.

Tian, Q., Nagpal, P., and Reed, J. W. 2003. Regulation of Arabidopsis SHY2/IAA3 protein turnover. Plant Journal 36: 643-651.

Remington, D. L., Vision, T. J., Guilfoyle, T. J., and Reed, J. W. 2004. Contrasting modes of diversification in the Aux/IAA and ARF gene families. Plant Physiology 135: 1738-1752.

Wilmoth, J. C., Wang, S., Tiwari, S. B., Joshi, A. D., Hagen, G., Guilfoyle, T. J., Alonso, J. M., Ecker, J. R., and Reed, J. W. 2005. NPH4/ARF7 and ARF19 promote leaf expansion and auxin-induced lateral root formation. Plant Journal 43: 118-130.

Weijers, D., Benkova, E., Jäger, K., Schlereth, A., Hamann, T., Kientz, M., Wilmoth, J. C., Reed, J. W., and Jürgens, G.. 2005. Developmental specificity of auxin response by pairs of ARF and Aux/IAA transcriptional regulators. EMBO Journal 24: 1874-1885.

Nagpal, P., Ellis, C. M., Weber, H., Ploense, S. E., Barkawi, L. S., Guilfoyle, T. J., Hagen, G., Alonso, J. M., Cohen, J. D., Farmer, E. E., Ecker, J. R., and Reed, J. W. 2005. Auxin Response Factors ARF6 and ARF8 promote jasmonic acid production and flower maturation. Development 132:
4107-4118.

Ellis, C. M., Nagpal, P., Young, J. C., Hagen, G., Guilfoyle, T. J. and Reed, J. W. 2005. AUXIN RESPONSE FACTOR1 and AUXIN RESPONSE FACTOR2 regulate senescence and floral organ abscission in Arabidopsis thaliana. Development in press.